STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ80332.1Putative sodium-solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (478 aa)    
Predicted Functional Partners:
EAZ80333.1
Acetyltransferase, GNAT family.
 
     0.936
EAZ80334.1
Putative amino acid racemase.
 
     0.933
EAZ79113.1
Putative PAS domain S-box.
  
 
 0.884
EFQ79250.1
Putative sensory box histidine kinase/response regulator.
  
 
 0.873
EAZ79960.1
Sensor histidine kinase/response regulator fusion protein.
   
 
 0.817
EAZ80908.1
Sensory box histidine kinase/response regulator.
   
 
 0.813
EAZ81992.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
     0.698
EAZ81677.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
     0.688
EAZ80335.1
Hypothetical protein.
 
     0.629
EAZ81019.1
PAS domain-containing protein.
   
 
 0.548
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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