STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ80520.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
EAZ80522.2
Outer membrane protein.
  
    0.764
EAZ80521.1
Glyoxalase family protein.
       0.762
EAZ80523.1
Hypothetical protein.
       0.762
EAZ80331.2
Putative abortive infection protein.
  
     0.554
EAZ81162.2
Glyoxalase family protein.
  
     0.482
EAZ79110.1
Hypothetical protein.
  
     0.470
EAZ80024.1
Putative bacterial transcription activator, effector binding domain protein.
  
     0.423
EAZ79189.1
Hypothetical protein.
  
     0.421
EAZ80524.1
Putative GloA protein.
       0.413
EAZ80525.1
Membrane protein.
       0.413
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.