STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ80594.1Spermidine/putrescine import ATP-binding protein PotA. (317 aa)    
Predicted Functional Partners:
EAZ81095.2
ABC transporter, ATP-binding protein.
 
      0.858
cysC
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
    
  0.830
EAZ80593.1
Hypothetical Cytosolic Protein.
       0.773
EAZ80023.1
Putative ABC transporter, permease protein.
 
      0.730
EAZ80595.1
ABC transporter ATPase component.
       0.718
rpsI
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
    0.685
EAZ80992.1
Iron compound ABC transporter, ATP-binding protein.
 
   
0.673
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
    0.613
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
     0.600
EAZ81180.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
     0.559
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.