STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ80720.1Bacteroidetes-specific membrane protein. (338 aa)    
Predicted Functional Partners:
EAZ80719.2
Cell surface protein.
 
     0.884
EAZ80076.1
Hypothetical protein.
  
     0.765
EAZ81463.1
Gliding motility-related protein TPR repeat-containing protein.
  
     0.754
EAZ80198.1
Transcriptional regulator.
  
     0.737
EAZ82067.1
Putative PKD domain protein.
 
     0.727
EAZ82150.1
Gliding motility-associated lipoprotein GldD.
  
     0.725
EAZ80193.1
Hypothetical protein.
  
     0.721
EFQ79223.1
Transcriptional regulator.
  
     0.717
EAZ81878.2
Gliding motility-associated lipoprotein GldJ.
 
     0.716
EAZ79490.1
Hypothetical protein.
  
     0.713
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.