STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ80837.1Hypothetical protein. (471 aa)    
Predicted Functional Partners:
EAZ80838.2
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.943
EAZ80836.1
Hypothetical protein.
 
     0.765
EAZ80012.1
Putative outer membrane protein, probably involved in nutrient binding.
 
 
 
 0.651
EAZ80643.1
spoOJ protein; Belongs to the ParB family.
  
 
 0.631
EAZ80451.1
Putative outer membrane protein probably involved in nutrient binding.
  
 
   0.599
EAZ80450.2
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.595
EAZ82622.1
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.577
EAZ80014.1
Putative outer membrane protein, probably involved in nutrient binding.
   
   0.567
EAZ82477.2
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.551
EAZ79130.1
Hypothetical protein.
  
 
   0.543
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.