STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ80851.1Putative Cytochrome c. (156 aa)    
Predicted Functional Partners:
EAZ80852.1
Hypothetical protein.
       0.773
EAZ80702.1
Putative outer membrane protein, OmpA family.
   
   0.568
EAZ81436.1
Outer membrane protein, peptidoglycan-associated lipoprotein.
   
   0.562
EAZ81607.1
Hypothetical protein.
   
   0.524
EAZ81711.1
Hypothetical protein.
   
   0.524
EAZ82172.1
Hypothetical protein.
   
   0.524
EAZ80299.1
Hypothetical protein.
   
   0.524
EAZ80432.2
Twin-arginine translocation pathway signal.
   
   0.524
EAZ80766.1
Hypothetical protein.
   
   0.524
EAZ83025.1
Hypothetical protein.
   
   0.524
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.