STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ79656.1Putative ABC transporter, permease protein. (808 aa)    
Predicted Functional Partners:
EAZ79634.1
ABC transporter, ATP-binding protein.
 
 0.985
EAZ79688.1
ABC transporter, ATP-binding protein.
 
 0.983
EAZ80303.1
ABC transporter, ATP-binding protein.
  
 0.941
lolD
Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.941
lolD-2
Lipoprotein-releasing system; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.941
EAZ79211.1
Putative macrolide efflux ABC transporter, ATP-binding protein.
  
 0.941
EAZ81017.1
Lipoprotein releasing system, ATP-binding protein.
  
 0.941
EAZ79633.1
Efflux transporter, MFP component, RND family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.870
EAZ79631.1
Two-component system sensor histidine kinase.
 
    0.784
EAZ79126.1
Two-component system sensor histidine kinase.
 
    0.784
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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