STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ82410.1Putative oxidoreductase, FAD-binding. (435 aa)    
Predicted Functional Partners:
EAZ82412.1
Oxidoreductase, short-chain dehydrogenase/reductase family.
    0.977
EAZ82409.1
Prenyltransferase, UbiA family; Belongs to the UbiA prenyltransferase family.
 
  
 0.956
EAZ82413.1
HAD-superfamily hydrolase.
 
     0.932
EAZ82411.1
Hypothetical protein.
 
     0.877
EAZ79401.1
NADP-dependent malic enzyme.
  
 
 0.877
EAZ81936.1
Ferredoxin-dependent glutamate synthase 1.
    
 0.842
EAZ79067.1
Transketolase.
    
 0.806
EAZ81204.1
2-oxoisovalerate dehydrogenase E1 component, beta subunit.
    
 0.806
EAZ80429.1
Probable Cytochrome c.
   
  0.786
EAZ82408.2
Hypothetical protein.
  
    0.775
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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