Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAZ82498.1Putative rhamnogalacturonan acetylesterase. (505 aa)    
Predicted Functional Partners:
EAZ82496.1
Hypothetical protein.
 
  0.965
EAZ79329.1
Hypothetical protein.
  0.899
EAZ82497.1
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
     0.837
EAZ81033.1
exo-poly-alpha-D-galacturonosidase; Belongs to the glycosyl hydrolase 28 family.
 
 
  0.824
EAZ81716.2
Galacturan 1,4-alpha-galacturonidase; Belongs to the glycosyl hydrolase 28 family.
  
 
  0.821
EAZ82939.1
Arabinan endo-1,5-alpha-L-arabinosidase.
 
     0.799
EFQ79226.1
Pectate lyase.
  
  
  0.734
EAZ80533.1
Glycosyl hydrolase, family 10.
  
 
  0.706
EAZ79735.1
Hypothetical protein.
  
 
  0.695
EAZ79738.1
Hypothetical protein.
  
 
  0.671
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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