STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ82614.1long-chain-fatty-acid--CoA ligase. (563 aa)    
Predicted Functional Partners:
EAZ82980.1
Putative bacitracin synthetase 3.
0.999
EFQ79232.1
Putative AMP-binding enzyme.
 0.996
EAZ82937.1
Lipase/esterase.
  
 0.907
EFQ79250.1
Putative sensory box histidine kinase/response regulator.
  
 
 0.837
EAZ81805.1
Putative long-chain-fatty-acid--CoA ligase.
  
 
0.811
EAZ79960.1
Sensor histidine kinase/response regulator fusion protein.
  
 
 0.799
EAZ80908.1
Sensory box histidine kinase/response regulator.
   
 
 0.781
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.772
EAZ81803.1
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein.
 
 0.771
EAZ80324.1
Malonyl CoA-acyl carrier protein transacylase.
   
 0.768
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.