STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ82674.1Phage tail collar domain protein. (180 aa)    
Predicted Functional Partners:
EAZ82675.2
Calx-beta domain protein.
 
    0.777
EAZ80517.1
Aspartyl/asparaginyl beta-hydroxylase family protein.
 
     0.767
EAZ79872.1
Aspartyl/asparaginyl beta-hydroxylase family protein.
  
     0.758
EAZ80585.1
Hypothetical protein.
   
   0.739
EAZ82673.2
Hypothetical protein.
       0.546
EAZ81716.2
Galacturan 1,4-alpha-galacturonidase; Belongs to the glycosyl hydrolase 28 family.
   
   0.537
EAZ80337.1
Parallel beta-helix repeat protein.
   
   0.537
EAZ81033.1
exo-poly-alpha-D-galacturonosidase; Belongs to the glycosyl hydrolase 28 family.
   
   0.537
EFQ79238.1
Probable acid phosphatase.
 
 
   0.529
EAZ83085.1
Phosphoserine phosphatase SerB.
  
  
 0.480
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.