STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ83110.1Hypothetical protein. (363 aa)    
Predicted Functional Partners:
EAZ80615.1
Hypothetical protein.
  
     0.737
EAZ79991.2
Putative CRISPR-associated protein Cas6.
  
     0.710
EAZ80757.1
Hypothetical protein.
  
     0.659
EAZ80372.1
Bacteroidetes-specific membrane protein.
  
     0.617
EFQ79237.1
Hypothetical protein.
       0.601
EFQ79238.1
Probable acid phosphatase.
       0.601
EAZ81463.1
Gliding motility-related protein TPR repeat-containing protein.
  
     0.596
EAZ79876.1
Lipoprotein.
 
     0.583
EAZ83111.1
tryptophan--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.582
EAZ80635.1
Hypothetical protein.
  
     0.577
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.