STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ83120.1MotA/TolQ/ExbB proton channel family protein. (230 aa)    
Predicted Functional Partners:
EAZ83119.1
ExbD/TolR family protein.
 
 
 0.987
EAZ83118.1
Putative TonB exported protein.
  
   0.902
EAZ80354.1
Membrane protein.
 
 
 0.845
EAZ80355.1
Membrane protein.
 
 
 0.842
EAZ83123.1
Putative ATP synthase F1, delta subunit.
 
  
 0.836
EAZ83117.1
Tetrahydrofolate synthase; Belongs to the folylpolyglutamate synthase family.
     
 0.809
EAZ83121.1
Hypothetical protein.
       0.791
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.789
EAZ82216.1
ABC transporter, ATP-binding protein.
  
     0.737
EAZ79530.1
Membrane protein.
  
     0.709
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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