STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ83157.2Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (367 aa)    
Predicted Functional Partners:
EAZ83154.1
Outer membrane lipoprotein.
 
  0.955
EAZ83155.2
HAE1 efflux family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  0.955
EFQ79252.1
Heavy metal efflux pump, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.945
EAZ81117.2
HAE1 efflux family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.872
EAZ81118.2
Outer membrane efflux protein.
 
  0.872
EAZ80759.2
Multidrug efflux pump BpeF; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.871
EAZ79847.2
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.870
EAZ80758.1
Multidrug resistance protein, FusA/NodT family.
 
  0.869
EAZ81556.2
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.806
EAZ83170.1
Putative outer membrane efflux protein.
  
  0.661
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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