STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ79061.1Hypothetical protein. (187 aa)    
Predicted Functional Partners:
EAZ81088.1
Hypothetical protein.
  
     0.772
EAZ82255.1
Site-specific recombinase, phage integrase family/ribosomal subunit interface protein.
  
     0.753
EAZ81671.1
Hypothetical protein.
 
     0.743
EAZ81471.1
uroporphyrinogen-III synthase.
  
     0.729
EAZ80599.1
Membrane protein.
  
     0.706
EFQ79268.1
Putative outer membrane protein.
  
     0.684
EAZ81229.1
Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.675
EAZ82375.1
Hypothetical protein.
  
     0.664
EAZ79610.1
Membrane protein.
  
     0.664
EAZ83253.1
Hypothetical protein.
  
     0.646
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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