STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ79211.1Putative macrolide efflux ABC transporter, ATP-binding protein. (238 aa)    
Predicted Functional Partners:
EAZ80023.1
Putative ABC transporter, permease protein.
  0.986
EAZ81095.2
ABC transporter, ATP-binding protein.
  0.986
EAZ79651.1
Putative ABC transporter, permease protein.
 
 0.959
EAZ79681.1
Putative FtsX-related transmembrane transport protein.
 
 0.959
EAZ79676.1
Putative ABC transporter, permease protein.
 
 0.953
EAZ79680.1
Putative ABC transporter, permease protein.
 
 0.953
EAZ79637.1
Putative ABC transporter, permease protein.
 
 0.952
EAZ82814.1
ABC transporter.
 
 0.952
EAZ79683.1
Efflux ABC transporter, permease protein.
 
 0.951
EAZ79684.1
Efflux ABC transporter, permease protein.
 
 0.951
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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