STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ79817.2Peptidase, M50 (S2P protease) family. (369 aa)    
Predicted Functional Partners:
EAZ79818.1
HAD-superfamily hydrolase.
       0.791
EAZ79223.1
Hypothetical protein.
  
     0.730
EAZ79964.1
Putative RNA-binding protein.
  
    0.713
EAZ83177.1
Hypothetical protein.
  
     0.654
EAZ81536.1
Hypothetical protein.
  
   
 0.652
EAZ81173.1
Hypothetical protein.
  
     0.651
EFQ79267.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
    0.631
EAZ82684.1
Hypothetical protein.
  
     0.601
EAZ81637.1
Hypothetical protein.
  
     0.593
EAZ79145.1
HNH endonuclease domain protein.
  
     0.582
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.