STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ79863.2Hypothetical protein. (106 aa)    
Predicted Functional Partners:
EAZ79860.1
Amidohydrolase 2.
 
  
 0.889
EAZ79861.1
Short-chain dehydrogenase/reductase family oxidoreductase.
 
    0.860
EAZ79862.1
L-fucose:H+ symporter permease.
 
    0.860
EAZ79858.1
Oxidoreductase, short-chain dehydrogenase/reductase family.
 
    0.696
EAZ79859.1
Fumarylacetoacetate hydrolase family protein.
 
     0.593
EAZ80438.1
Hypothetical protein.
  
  
 0.561
EAZ83166.1
Putative carbohydrate kinase.
  
  
 0.545
EAZ79864.1
Pectin acetylesterase.
       0.436
EAZ82879.1
Hydrolase, UxaA family.
 
   
 0.416
EAZ82252.1
Putative alpha-L-fucosidase.
 
     0.415
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.