STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ80195.1Transcriptional regulator, MarR family/acetyltransferase, GNAT family protein. (154 aa)    
Predicted Functional Partners:
hisI
phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family.
    
  0.719
cmk
Cytidylate kinase.
 
 
    0.602
EAZ80196.1
Endoribonuclease.
       0.553
EAZ80194.1
Putative universal stress protein.
       0.520
EAZ82911.1
Argininosuccinate synthase.
  
 
 0.485
EAZ81815.1
Putative metal-dependent hydrolase.
 
  
  0.431
EAZ79152.1
Putative toxin-antitoxin system, antitoxin component, Xre family.
    
  0.425
EAZ80224.1
Putative transcriptional regulator.
    
  0.425
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.