STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ80219.1Phosphodiesterase I. (416 aa)    
Predicted Functional Partners:
EAZ80218.1
Protozoan/cyanobacterial globin family protein.
       0.773
EAZ80217.1
Formate/nitrite transporter family (FNT).
       0.639
EAZ80216.1
Hypothetical protein.
       0.626
EAZ81188.1
Hypothetical protein.
    
  0.592
EAZ82489.1
Aminopeptidase.
  
     0.465
EAZ79487.1
Putative peptidase M28.
  
     0.444
EFQ79258.1
Glycerophosphoryl diester phosphodiesterase family protein.
 
  0.415
EAZ83207.1
Putative dipeptidyl peptidase IV.
  
     0.411
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.