STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ79090.1Putative TonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (223 aa)    
Predicted Functional Partners:
EAZ80355.1
Membrane protein.
  
   0.894
EAZ80354.1
Membrane protein.
  
   0.877
EAZ80541.1
Putative outer membrane protein probably involved in nutrient binding.
 
 
 0.867
EAZ80012.1
Putative outer membrane protein, probably involved in nutrient binding.
  
 
 0.845
EAZ80352.2
MotA/TolQ/ExbB proton channel family protein.
 
   0.836
EAZ79400.1
Hypothetical protein.
 
    0.754
EAZ81436.1
Outer membrane protein, peptidoglycan-associated lipoprotein.
 
 
 
 0.746
EAZ80702.1
Putative outer membrane protein, OmpA family.
 
 
 
 0.731
EAZ83119.1
ExbD/TolR family protein.
  
   0.706
EAZ79113.1
Putative PAS domain S-box.
  
 
 0.661
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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