STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ80872.1Putative outer membrane insertion C- signal. (1674 aa)    
Predicted Functional Partners:
EAZ80873.2
Hypothetical protein.
 
     0.947
EAZ79113.1
Putative PAS domain S-box.
  
  
 0.877
EFQ79250.1
Putative sensory box histidine kinase/response regulator.
  
  
 0.783
EAZ81473.1
Putative outer membrane protein.
  
     0.769
EAZ80585.1
Hypothetical protein.
  
     0.764
EAZ83138.2
Hypothetical protein.
  
     0.760
EAZ83037.1
Glycosyl transferase.
  
     0.759
EAZ81550.1
Hypothetical protein.
 
     0.759
EAZ81541.1
Putative cadherin domain protein.
  
    0.757
EAZ80580.1
Hypothetical protein.
  
     0.742
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.