Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAZ79188.2 | EAZ80281.1 | ALPR1_13994 | ALPR1_05145 | Putative DNA processing protein DprA. | Mg chelatase-like protein. | 0.858 |
EAZ79188.2 | EAZ80311.1 | ALPR1_13994 | ALPR1_05295 | Putative DNA processing protein DprA. | Putative ComEC/Rec2 family protein. | 0.879 |
EAZ79188.2 | EAZ81175.1 | ALPR1_13994 | ALPR1_19103 | Putative DNA processing protein DprA. | Endonuclease; Belongs to the UPF0102 family. | 0.685 |
EAZ79188.2 | EAZ81814.1 | ALPR1_13994 | ALPR1_01195 | Putative DNA processing protein DprA. | Competence protein F-related protein. | 0.877 |
EAZ80281.1 | EAZ79188.2 | ALPR1_05145 | ALPR1_13994 | Mg chelatase-like protein. | Putative DNA processing protein DprA. | 0.858 |
EAZ80281.1 | EAZ80311.1 | ALPR1_05145 | ALPR1_05295 | Mg chelatase-like protein. | Putative ComEC/Rec2 family protein. | 0.805 |
EAZ80281.1 | EAZ81175.1 | ALPR1_05145 | ALPR1_19103 | Mg chelatase-like protein. | Endonuclease; Belongs to the UPF0102 family. | 0.779 |
EAZ80281.1 | EAZ81814.1 | ALPR1_05145 | ALPR1_01195 | Mg chelatase-like protein. | Competence protein F-related protein. | 0.828 |
EAZ80281.1 | ruvC | ALPR1_05145 | ALPR1_05445 | Mg chelatase-like protein. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.691 |
EAZ80311.1 | EAZ79188.2 | ALPR1_05295 | ALPR1_13994 | Putative ComEC/Rec2 family protein. | Putative DNA processing protein DprA. | 0.879 |
EAZ80311.1 | EAZ80281.1 | ALPR1_05295 | ALPR1_05145 | Putative ComEC/Rec2 family protein. | Mg chelatase-like protein. | 0.805 |
EAZ80311.1 | EAZ81175.1 | ALPR1_05295 | ALPR1_19103 | Putative ComEC/Rec2 family protein. | Endonuclease; Belongs to the UPF0102 family. | 0.664 |
EAZ80311.1 | EAZ81814.1 | ALPR1_05295 | ALPR1_01195 | Putative ComEC/Rec2 family protein. | Competence protein F-related protein. | 0.850 |
EAZ80311.1 | ruvC | ALPR1_05295 | ALPR1_05445 | Putative ComEC/Rec2 family protein. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.418 |
EAZ81174.1 | EAZ81175.1 | ALPR1_19098 | ALPR1_19103 | Hypothetical protein. | Endonuclease; Belongs to the UPF0102 family. | 0.689 |
EAZ81174.1 | EAZ81177.1 | ALPR1_19098 | ALPR1_19113 | Hypothetical protein. | Hypothetical protein. | 0.497 |
EAZ81174.1 | EAZ81178.1 | ALPR1_19098 | ALPR1_19118 | Hypothetical protein. | Hypothetical protein. | 0.484 |
EAZ81174.1 | lipB | ALPR1_19098 | ALPR1_19108 | Hypothetical protein. | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.497 |
EAZ81175.1 | EAZ79188.2 | ALPR1_19103 | ALPR1_13994 | Endonuclease; Belongs to the UPF0102 family. | Putative DNA processing protein DprA. | 0.685 |
EAZ81175.1 | EAZ80281.1 | ALPR1_19103 | ALPR1_05145 | Endonuclease; Belongs to the UPF0102 family. | Mg chelatase-like protein. | 0.779 |
page 1 of 3