STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAZ81494.2chondroitinase-AC. (713 aa)    
Predicted Functional Partners:
EAZ81385.1
Hypothetical protein.
 
  
  0.774
EAZ83211.1
Hypothetical protein.
 
  
 0.673
EAZ82290.1
Putative exported phosphoesterase protein.
 
   
 0.671
EAZ80125.1
Putative endonuclease/exonuclease/phosphatase family protein.
  
  
  0.654
EAZ79906.1
Hypothetical protein.
  
     0.559
EAZ80127.1
Putative Tat (twin-arginine translocation) pathway signal sequence containing protein.
 
     0.543
EAZ81206.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.543
EAZ83020.1
Hypothetical protein.
 
  
  0.530
EAZ80017.2
1,4-alpha-glucan-branching enzyme.
    
  0.521
EAZ80492.1
Glycosyl hydrolase.
  
  
 0.499
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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