STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFQ79229.1Exopolysaccharide biosynthesis protein, sugar transferase. (335 aa)    
Predicted Functional Partners:
EAZ82454.1
Group 2 family glycosyl transferase.
 
  
  0.939
EAZ82444.1
Glycosyl transferase.
 
     0.855
EAZ82443.1
PGL/P-HBAD biosynthesis glycosyltransferase.
 
     0.838
EAZ82453.1
B-glycosyltransferase, glycosyltransferase family 2 protein.
 
     0.806
EAZ82430.1
Glycosyl transferase, group 2 family.
  
     0.775
EAZ79100.1
Glycosyl transferase family 2 protein.
  
  
  0.771
EAZ82452.1
Glycosyl transferase.
  
 
  0.767
EAZ82457.1
Glycosyl transferase, family 4.
  
 
  0.767
EAZ82455.1
Glycosyl transferase; Overlaps another CDS with the same product name.
    
  0.759
EAZ82456.1
Glycosyl transferase; Overlaps another CDS with the same product name.
    
  0.759
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.