STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFQ79231.1Probable TonB-dependent receptor. (746 aa)    
Predicted Functional Partners:
EAZ82985.1
acyl-CoA dehydrogenase.
       0.773
EAZ82986.1
Putative amino acid adenyltransferase; Belongs to the ATP-dependent AMP-binding enzyme family.
       0.773
EAZ82987.1
Putative L-proline 4-hydroxylase.
       0.718
EAZ82981.1
Membrane protein.
     0.552
EAZ82982.1
Putative ornithine cyclodeaminase.
       0.515
EAZ80024.1
Putative bacterial transcription activator, effector binding domain protein.
  
     0.501
EAZ82980.1
Putative bacitracin synthetase 3.
  
  
 0.497
EAZ80532.1
Hypothetical protein.
  
     0.485
EAZ81837.1
Putative tetratricopeptide TPR_2.
   
   0.448
EAZ81845.1
Putative transporter.
   
   0.448
Your Current Organism:
Algoriphagus machipongonensis
NCBI taxonomy Id: 388413
Other names: A. machipongonensis, ATCC BAA-2233, Algoriphagus machipongonensis Alegado et al. 2013, Algoriphagus sp. PR1, DSM 24695, strain PR1
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