STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crtHCrtH. (492 aa)    
Predicted Functional Partners:
crtQ
CrtQ; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
 
  
 0.931
pys
Pys.
 
 
 0.861
A19Y_0997
Carotene 7,8-desaturase.
 
  
 0.767
A19Y_0532
Hypothetical protein; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
  
 
  0.733
sqs
Sqs.
  
 
 0.713
chlD
ChlD; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
 
 0.694
A19Y_1546
Hypothetical protein.
  
     0.679
mcyG
McyG.
  
 
 0.665
chlG
ChlG.
  
 
 0.645
A19Y_1081
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY.
  
 
 0.641
Your Current Organism:
Planktothrix agardhii
NCBI taxonomy Id: 388467
Other names: P. agardhii NIVA-CYA 126/8, Planktothrix agardhii NIVA-CYA 126/8
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