STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A19Y_1623Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain. (572 aa)    
Predicted Functional Partners:
guaA
GuaA; Catalyzes the synthesis of GMP from XMP.
    
  0.777
A19Y_1622
Serine/threonine protein kinase.
       0.773
gvpW
GvpW.
 
     0.671
A19Y_0517
Hypothetical protein.
  
     0.645
A19Y_1620
Hypothetical protein; Ferredoxin.
 
     0.644
A19Y_0793
Hypothetical protein; AAA ATPase containing von Willebrand factor type A (vWA) domain.
  
     0.612
phoD
PhoD.
  
     0.609
A19Y_1614
Predicted hydrocarbon binding protein (contains V4R domain).
  
     0.573
panC
PanC; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.
    
  0.571
bchJ
BchJ.
  
     0.558
Your Current Organism:
Planktothrix agardhii
NCBI taxonomy Id: 388467
Other names: P. agardhii NIVA-CYA 126/8, Planktothrix agardhii NIVA-CYA 126/8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.