STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A19Y_2023Hypothetical protein. (354 aa)    
Predicted Functional Partners:
A19Y_2203
Hypothetical protein; DNA segregation ATPase FtsK/SpoIIIE and related proteins.
   
   0.767
A19Y_0906
Bacterial surface proteins containing Ig-like domains.
 
     0.766
A19Y_0179
Putative secretion activating protein.
  
     0.750
A19Y_4669
Hypothetical protein.
  
     0.745
A19Y_4326
Hypothetical protein; Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase).
  
     0.735
hlyD
HlyD.
  
     0.730
A19Y_3535
Hypothetical protein; Beta-lactamase class A.
  
     0.730
A19Y_1192
Hypothetical protein.
  
     0.714
A19Y_2680
Hypothetical protein; Cyclopropane fatty acid synthase and related methyltransferases.
  
     0.714
A19Y_0054
Hypothetical protein.
  
     0.710
Your Current Organism:
Planktothrix agardhii
NCBI taxonomy Id: 388467
Other names: P. agardhii NIVA-CYA 126/8, Planktothrix agardhii NIVA-CYA 126/8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.