STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A19Y_2146Predicted unusual protein kinase. (559 aa)    
Predicted Functional Partners:
A19Y_0933
UDP-N-acetylglucosamine--peptide.
  
 
 0.628
gspE
GspE.
       0.568
A19Y_1081
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY.
  
 0.458
A19Y_3832
Hypothetical protein.
   
 
  0.438
mcyE
McyE.
   
  0.413
hemB
HemB; Belongs to the ALAD family.
    
 0.409
Your Current Organism:
Planktothrix agardhii
NCBI taxonomy Id: 388467
Other names: P. agardhii NIVA-CYA 126/8, Planktothrix agardhii NIVA-CYA 126/8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.