STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A19Y_2574Predicted membrane protein. (566 aa)    
Predicted Functional Partners:
A19Y_2575
Hypothetical protein.
 
     0.723
A19Y_1063
Hypothetical protein.
  
     0.698
A19Y_2573
Hypothetical protein.
       0.647
A19Y_3273
Hypothetical protein.
  
     0.637
A19Y_1269
Hypothetical protein.
  
     0.627
A19Y_0768
TPR repeat-containing protein.
  
     0.539
A19Y_3516
Hypothetical protein.
  
     0.536
A19Y_2572
Uncharacterized protein conserved in cyanobacteria.
       0.527
A19Y_0607
Hypothetical protein.
  
     0.519
A19Y_2213
Hypothetical protein.
  
     0.519
Your Current Organism:
Planktothrix agardhii
NCBI taxonomy Id: 388467
Other names: P. agardhii NIVA-CYA 126/8, Planktothrix agardhii NIVA-CYA 126/8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.