Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A19Y_0993 | A19Y_2445 | A19Y_0993 | A19Y_2445 | Hypothetical protein; Sulfite oxidase and related enzymes. | Formate dehydrogenase. | 0.512 |
A19Y_0993 | narB | A19Y_0993 | A19Y_2824 | Hypothetical protein; Sulfite oxidase and related enzymes. | NarB; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.600 |
A19Y_0993 | panC | A19Y_0993 | A19Y_2708 | Hypothetical protein; Sulfite oxidase and related enzymes. | PanC; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family. | 0.466 |
A19Y_0993 | yfkN | A19Y_0993 | A19Y_4382 | Hypothetical protein; Sulfite oxidase and related enzymes. | YfkN; Belongs to the 5'-nucleotidase family. | 0.501 |
A19Y_2445 | A19Y_0993 | A19Y_2445 | A19Y_0993 | Formate dehydrogenase. | Hypothetical protein; Sulfite oxidase and related enzymes. | 0.512 |
A19Y_2445 | yfkN | A19Y_2445 | A19Y_4382 | Formate dehydrogenase. | YfkN; Belongs to the 5'-nucleotidase family. | 0.522 |
A19Y_4261 | guaA | A19Y_4261 | A19Y_2843 | Adenosine deaminase. | GuaA; Catalyzes the synthesis of GMP from XMP. | 0.551 |
A19Y_4261 | guaB | A19Y_4261 | A19Y_1658 | Adenosine deaminase. | GuaB. | 0.688 |
A19Y_4261 | yfkN | A19Y_4261 | A19Y_4382 | Adenosine deaminase. | YfkN; Belongs to the 5'-nucleotidase family. | 0.734 |
cinA | gyrB | A19Y_4622 | A19Y_3152 | CinA; Belongs to the CinA family. | GyrB. | 0.882 |
cinA | panC | A19Y_4622 | A19Y_2708 | CinA; Belongs to the CinA family. | PanC; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family. | 0.517 |
cinA | yfkN | A19Y_4622 | A19Y_4382 | CinA; Belongs to the CinA family. | YfkN; Belongs to the 5'-nucleotidase family. | 0.755 |
guaA | A19Y_4261 | A19Y_2843 | A19Y_4261 | GuaA; Catalyzes the synthesis of GMP from XMP. | Adenosine deaminase. | 0.551 |
guaA | guaB | A19Y_2843 | A19Y_1658 | GuaA; Catalyzes the synthesis of GMP from XMP. | GuaB. | 0.999 |
guaA | gyrB | A19Y_2843 | A19Y_3152 | GuaA; Catalyzes the synthesis of GMP from XMP. | GyrB. | 0.914 |
guaA | panC | A19Y_2843 | A19Y_2708 | GuaA; Catalyzes the synthesis of GMP from XMP. | PanC; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family. | 0.753 |
guaA | pyrE-2 | A19Y_2843 | A19Y_1959 | GuaA; Catalyzes the synthesis of GMP from XMP. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.936 |
guaA | yfkN | A19Y_2843 | A19Y_4382 | GuaA; Catalyzes the synthesis of GMP from XMP. | YfkN; Belongs to the 5'-nucleotidase family. | 0.788 |
guaB | A19Y_4261 | A19Y_1658 | A19Y_4261 | GuaB. | Adenosine deaminase. | 0.688 |
guaB | guaA | A19Y_1658 | A19Y_2843 | GuaB. | GuaA; Catalyzes the synthesis of GMP from XMP. | 0.999 |
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