STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A19Y_4549Hypothetical protein. (69 aa)    
Predicted Functional Partners:
epsB
EpsB.
  
 0.992
A19Y_3914
ATPase with chaperone activity.
  
 0.992
wzt
Wzt.
  
  
 0.780
rfbA
RfbA.
  
  
 0.770
A19Y_3318
Sugar transferase.
  
 
 0.701
A19Y_0760
ATPase involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.670
A19Y_1451
Hypothetical protein; Glycosyltransferase.
  
 
 0.665
A19Y_1450
Uncharacterized protein conserved in bacteria.
  
 
 0.662
rfbC-2
RfbC.
  
 
 0.662
A19Y_1107
Undecaprenyl-phosphate galactosephosphotransferase.
  
 
 0.629
Your Current Organism:
Planktothrix agardhii
NCBI taxonomy Id: 388467
Other names: P. agardhii NIVA-CYA 126/8, Planktothrix agardhii NIVA-CYA 126/8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.