Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A19Y_2926 | A19Y_4684 | A19Y_2926 | A19Y_4684 | Hypothetical protein. | Dehydrogenase. | 0.674 |
A19Y_4684 | A19Y_2926 | A19Y_4684 | A19Y_2926 | Dehydrogenase. | Hypothetical protein. | 0.674 |
A19Y_4684 | A19Y_4685 | A19Y_4684 | A19Y_4685 | Dehydrogenase. | Dehydrogenase. | 0.957 |
A19Y_4684 | gltA | A19Y_4684 | A19Y_0262 | Dehydrogenase. | GltA. | 0.730 |
A19Y_4684 | gltB | A19Y_4684 | A19Y_0976 | Dehydrogenase. | GltB. | 0.729 |
A19Y_4684 | gltS | A19Y_4684 | A19Y_0975 | Dehydrogenase. | GltS. | 0.729 |
A19Y_4684 | mcyA | A19Y_4684 | A19Y_2223 | Dehydrogenase. | McyA. | 0.813 |
A19Y_4684 | mcyC | A19Y_4684 | A19Y_2221 | Dehydrogenase. | McyC; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.772 |
A19Y_4684 | mcyD | A19Y_4684 | A19Y_2228 | Dehydrogenase. | McyD. | 0.845 |
A19Y_4684 | mcyE | A19Y_4684 | A19Y_2227 | Dehydrogenase. | McyE. | 0.798 |
A19Y_4684 | mcyG | A19Y_4684 | A19Y_2226 | Dehydrogenase. | McyG. | 0.854 |
A19Y_4685 | A19Y_4684 | A19Y_4685 | A19Y_4684 | Dehydrogenase. | Dehydrogenase. | 0.957 |
A19Y_4685 | gltA | A19Y_4685 | A19Y_0262 | Dehydrogenase. | GltA. | 0.730 |
A19Y_4685 | gltB | A19Y_4685 | A19Y_0976 | Dehydrogenase. | GltB. | 0.729 |
A19Y_4685 | gltS | A19Y_4685 | A19Y_0975 | Dehydrogenase. | GltS. | 0.729 |
A19Y_4685 | mcyA | A19Y_4685 | A19Y_2223 | Dehydrogenase. | McyA. | 0.813 |
A19Y_4685 | mcyC | A19Y_4685 | A19Y_2221 | Dehydrogenase. | McyC; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.772 |
A19Y_4685 | mcyD | A19Y_4685 | A19Y_2228 | Dehydrogenase. | McyD. | 0.845 |
A19Y_4685 | mcyE | A19Y_4685 | A19Y_2227 | Dehydrogenase. | McyE. | 0.798 |
A19Y_4685 | mcyG | A19Y_4685 | A19Y_2226 | Dehydrogenase. | McyG. | 0.854 |
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