STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T2DPC9_PHAVUUncharacterized protein. (299 aa)    
Predicted Functional Partners:
V7BQH4_PHAVU
Uncharacterized protein.
    
 
 0.873
V7CUD5_PHAVU
NAC domain-containing protein.
  
     0.534
V7BQ41_PHAVU
NAC domain-containing protein.
  
     0.530
V7D2D1_PHAVU
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.529
V7C0V0_PHAVU
Uncharacterized protein.
  
     0.527
V7C8E4_PHAVU
HTH myb-type domain-containing protein.
  
     0.527
V7BDE6_PHAVU
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.524
V7B6L0_PHAVU
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.523
V7B379_PHAVU
Uncharacterized protein.
  
     0.521
V7BNT2_PHAVU
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.521
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
Server load: low (16%) [HD]