V7AE41_PHAVU protein (Phaseolus vulgaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

V7AE41_PHAVU

Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family. (500 aa)

Predicted Functional Partners:

V7B5A6_PHAVU

0.557

V7CQ98_PHAVU

0.557

V7AII1_PHAVU

0.554

V7BTN0_PHAVU

0.542

V7BV04_PHAVU

0.542

V7CLQ8_PHAVU

0.542

V7CP18_PHAVU

0.542

V7CBR0_PHAVU

0.510

V7ANC7_PHAVU

0.503

V7C6Q6_PHAVU

0.503

Your Current Organism:

Phaseolus vulgaris

NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V7AE41_PHAVU	V7AII1_PHAVU	V7AE41	V7AII1	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.	0.554
V7AE41_PHAVU	V7ANC7_PHAVU	V7AE41	V7ANC7	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	A_deaminase domain-containing protein.	0.503
V7AE41_PHAVU	V7B5A6_PHAVU	V7AE41	V7B5A6	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	Uncharacterized protein.	0.557
V7AE41_PHAVU	V7BTN0_PHAVU	V7AE41	V7BTN0	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	Uncharacterized protein.	0.542
V7AE41_PHAVU	V7BV04_PHAVU	V7AE41	V7BV04	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	Uncharacterized protein.	0.542
V7AE41_PHAVU	V7C6Q6_PHAVU	V7AE41	V7C6Q6	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	0.503
V7AE41_PHAVU	V7CBR0_PHAVU	V7AE41	V7CBR0	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	FPL domain-containing protein.	0.510
V7AE41_PHAVU	V7CLQ8_PHAVU	V7AE41	V7CLQ8	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	Uncharacterized protein.	0.542
V7AE41_PHAVU	V7CP18_PHAVU	V7AE41	V7CP18	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	Uncharacterized protein.	0.542
V7AE41_PHAVU	V7CQ98_PHAVU	V7AE41	V7CQ98	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	Uncharacterized protein.	0.557
V7AII1_PHAVU	V7AE41_PHAVU	V7AII1	V7AE41	Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	0.554
V7ANC7_PHAVU	V7AE41_PHAVU	V7ANC7	V7AE41	A_deaminase domain-containing protein.	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	0.503
V7ANC7_PHAVU	V7C6Q6_PHAVU	V7ANC7	V7C6Q6	A_deaminase domain-containing protein.	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	0.902
V7ANC7_PHAVU	V7CBR0_PHAVU	V7ANC7	V7CBR0	A_deaminase domain-containing protein.	FPL domain-containing protein.	0.999
V7B5A6_PHAVU	V7AE41_PHAVU	V7B5A6	V7AE41	Uncharacterized protein.	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	0.557
V7B5A6_PHAVU	V7CBR0_PHAVU	V7B5A6	V7CBR0	Uncharacterized protein.	FPL domain-containing protein.	0.503
V7BTN0_PHAVU	V7AE41_PHAVU	V7BTN0	V7AE41	Uncharacterized protein.	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	0.542
V7BTN0_PHAVU	V7CBR0_PHAVU	V7BTN0	V7CBR0	Uncharacterized protein.	FPL domain-containing protein.	0.424
V7BV04_PHAVU	V7AE41_PHAVU	V7BV04	V7AE41	Uncharacterized protein.	Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.	0.542
V7BV04_PHAVU	V7CBR0_PHAVU	V7BV04	V7CBR0	Uncharacterized protein.	FPL domain-containing protein.	0.424