STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7AI73_PHAVUHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (126 aa)    
Predicted Functional Partners:
V7B7P9_PHAVU
Uncharacterized protein.
    
 0.953
V7BLX6_PHAVU
SWIB domain-containing protein.
    
 0.924
V7BRK7_PHAVU
Plus3 domain-containing protein.
    
 0.924
V7CKQ4_PHAVU
GYF domain-containing protein.
    
 0.924
PHAVU_L006100g
Plus3 domain-containing protein.
    
 0.924
V7AJS3_PHAVU
Histone domain-containing protein; Belongs to the histone H2B family.
  
 0.893
V7BIU9_PHAVU
Histone H2B; Belongs to the histone H2B family.
  
 0.893
V7ARJ5_PHAVU
Histone domain-containing protein.
   
 0.891
V7BEQ4_PHAVU
Histone H2B; Belongs to the histone H2B family.
 
 0.886
V7AES3_PHAVU
Histone H2B; Belongs to the histone H2B family.
  
 0.885
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.