STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7AJY7_PHAVUUncharacterized protein. (409 aa)    
Predicted Functional Partners:
V7CUC9_PHAVU
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 
 0.947
V7CBE8_PHAVU
PCI domain-containing protein.
   
 
 0.940
V7AZN2_PHAVU
Uncharacterized protein.
    
 
 0.878
V7CVA2_PHAVU
Uncharacterized protein.
    
 
 0.878
V7AIA6_PHAVU
EF-hand domain-containing protein.
    
 
 0.622
V7ALP5_PHAVU
Uncharacterized protein.
    
 
 0.622
V7ANX8_PHAVU
EF-hand domain-containing protein.
    
 
 0.622
V7B9C1_PHAVU
Uncharacterized protein.
    
 
 0.622
V7BA09_PHAVU
Uncharacterized protein.
    
 
 0.622
V7BQK0_PHAVU
EF-hand domain-containing protein.
    
 
 0.622
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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