STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7AT32_PHAVUEpimerase domain-containing protein. (272 aa)    
Predicted Functional Partners:
V7AE69_PHAVU
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.776
V7CGW4_PHAVU
Ubiquitin-like domain-containing protein.
   
  0.672
V7C884_PHAVU
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.639
V7CSW5_PHAVU
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.639
V7BB27_PHAVU
Uncharacterized protein.
   
 0.638
V7BG07_PHAVU
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.638
V7BME5_PHAVU
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.638
V7CGG5_PHAVU
Uncharacterized protein.
   
 0.638
V7AZ27_PHAVU
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.633
V7CAI0_PHAVU
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.633
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.