STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7AYB0_PHAVUPost-SET domain-containing protein. (90 aa)    
Predicted Functional Partners:
V7BFV1_PHAVU
Uncharacterized protein.
   
 0.610
V7ADB2_PHAVU
B30.2/SPRY domain-containing protein.
    
 0.547
V7BFC6_PHAVU
WD_REPEATS_REGION domain-containing protein.
   
 0.508
V7BYM3_PHAVU
WD_REPEATS_REGION domain-containing protein.
   
 0.508
V7D2Q7_PHAVU
Zinc-hook domain-containing protein.
    
 0.466
V7AS46_PHAVU
Ubiquitin-like domain-containing protein.
    
  0.446
V7D161_PHAVU
Ubiquitin-like domain-containing protein.
    
  0.446
V7CGW4_PHAVU
Ubiquitin-like domain-containing protein.
    
  0.437
V7BUH1_PHAVU
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.423
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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