STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7B9I4_PHAVUCBFD_NFYB_HMF domain-containing protein. (277 aa)    
Predicted Functional Partners:
V7AGW1_PHAVU
Uncharacterized protein.
    
 
 0.855
PVTBP2
TATA-box binding protein.
    
 
 0.761
PVTBP1
TATA-box binding protein.
    
 
 0.761
V7CW68_PHAVU
Uncharacterized protein.
    
 
 0.761
K7W5D2_PHAVU
TATA-binding protein-associated phosphoprotein Dr1 protein.
   
 
 0.684
V7AYG1_PHAVU
Uncharacterized protein.
   
 
 0.684
V7C8R9_PHAVU
Uncharacterized protein.
   
 
 0.684
V7CAG8_PHAVU
Uncharacterized protein.
   
 
 0.684
V7CAL0_PHAVU
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.684
V7AJZ3_PHAVU
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
      
 0.416
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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