STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7BAI1_PHAVUUncharacterized protein. (619 aa)    
Predicted Functional Partners:
V7BCV7_PHAVU
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.758
V7BPY5_PHAVU
TOG domain-containing protein.
   
 0.658
V7BVF3_PHAVU
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.647
V7AE59_PHAVU
Nop domain-containing protein.
  
 
 0.646
V7C1R5_PHAVU
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 0.628
V7AHD7_PHAVU
C2H2-type domain-containing protein.
    
 0.626
V7BG01_PHAVU
Uncharacterized protein.
   
 0.622
V7BL15_PHAVU
Uncharacterized protein.
   
 0.622
V7B9N8_PHAVU
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.607
V7BK12_PHAVU
CP-type G domain-containing protein.
  
 0.593
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.