STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7BHY2_PHAVUSHS2_Rpb7-N domain-containing protein. (180 aa)    
Predicted Functional Partners:
V7AD36_PHAVU
RNA_pol_L_2 domain-containing protein.
   
 0.980
V7AUR0_PHAVU
Uncharacterized protein.
   
 0.976
V7AL44_PHAVU
RPOL4c domain-containing protein.
   
 0.974
V7CKF5_PHAVU
RPOLD domain-containing protein.
   
 0.974
V7BME8_PHAVU
RTR1-type domain-containing protein.
    
 0.964
V7BNG0_PHAVU
RPOLD domain-containing protein.
   
 0.954
V7C708_PHAVU
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
   
 0.954
V7CVL5_PHAVU
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
   
 0.954
V7BA71_PHAVU
Uncharacterized protein.
   
 0.951
V7BEN4_PHAVU
Uncharacterized protein.
   
 0.951
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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