V7C237_PHAVU protein (Phaseolus vulgaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

V7C237_PHAVU

CitMHS domain-containing protein. (540 aa)

Predicted Functional Partners:

V7AFL8_PHAVU

0.652

V7AHP7_PHAVU

0.652

V7ANQ5_PHAVU

0.543

V7BGY9_PHAVU

0.543

V7C5C5_PHAVU

0.543

V7C2F1_PHAVU

0.419

V7CY88_PHAVU

0.419

Your Current Organism:

Phaseolus vulgaris

NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V7AFL8_PHAVU	V7ANQ5_PHAVU	V7AFL8	V7ANQ5	LMWPc domain-containing protein.	ATPase; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subseq [...]	0.714
V7AFL8_PHAVU	V7BGY9_PHAVU	V7AFL8	V7BGY9	LMWPc domain-containing protein.	ArsA_ATPase domain-containing protein.	0.714
V7AFL8_PHAVU	V7C237_PHAVU	V7AFL8	V7C237	LMWPc domain-containing protein.	CitMHS domain-containing protein.	0.652
V7AFL8_PHAVU	V7C5C5_PHAVU	V7AFL8	V7C5C5	LMWPc domain-containing protein.	Uncharacterized protein.	0.714
V7AHP7_PHAVU	V7ANQ5_PHAVU	V7AHP7	V7ANQ5	LMWPc domain-containing protein.	ATPase; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subseq [...]	0.714
V7AHP7_PHAVU	V7BGY9_PHAVU	V7AHP7	V7BGY9	LMWPc domain-containing protein.	ArsA_ATPase domain-containing protein.	0.714
V7AHP7_PHAVU	V7C237_PHAVU	V7AHP7	V7C237	LMWPc domain-containing protein.	CitMHS domain-containing protein.	0.652
V7AHP7_PHAVU	V7C5C5_PHAVU	V7AHP7	V7C5C5	LMWPc domain-containing protein.	Uncharacterized protein.	0.714
V7ANQ5_PHAVU	V7AFL8_PHAVU	V7ANQ5	V7AFL8	ATPase; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subseq [...]	LMWPc domain-containing protein.	0.714
V7ANQ5_PHAVU	V7AHP7_PHAVU	V7ANQ5	V7AHP7	ATPase; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subseq [...]	LMWPc domain-containing protein.	0.714
V7ANQ5_PHAVU	V7C237_PHAVU	V7ANQ5	V7C237	ATPase; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subseq [...]	CitMHS domain-containing protein.	0.543
V7BGY9_PHAVU	V7AFL8_PHAVU	V7BGY9	V7AFL8	ArsA_ATPase domain-containing protein.	LMWPc domain-containing protein.	0.714
V7BGY9_PHAVU	V7AHP7_PHAVU	V7BGY9	V7AHP7	ArsA_ATPase domain-containing protein.	LMWPc domain-containing protein.	0.714
V7BGY9_PHAVU	V7C237_PHAVU	V7BGY9	V7C237	ArsA_ATPase domain-containing protein.	CitMHS domain-containing protein.	0.543
V7C237_PHAVU	V7AFL8_PHAVU	V7C237	V7AFL8	CitMHS domain-containing protein.	LMWPc domain-containing protein.	0.652
V7C237_PHAVU	V7AHP7_PHAVU	V7C237	V7AHP7	CitMHS domain-containing protein.	LMWPc domain-containing protein.	0.652
V7C237_PHAVU	V7ANQ5_PHAVU	V7C237	V7ANQ5	CitMHS domain-containing protein.	ATPase; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subseq [...]	0.543
V7C237_PHAVU	V7BGY9_PHAVU	V7C237	V7BGY9	CitMHS domain-containing protein.	ArsA_ATPase domain-containing protein.	0.543
V7C237_PHAVU	V7C2F1_PHAVU	V7C237	V7C2F1	CitMHS domain-containing protein.	Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.	0.419
V7C237_PHAVU	V7C5C5_PHAVU	V7C237	V7C5C5	CitMHS domain-containing protein.	Uncharacterized protein.	0.543