STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7CBP0_PHAVUBifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (775 aa)    
Predicted Functional Partners:
T2DP45_PHAVU
60S ribosomal protein L8-3-like protein.
    
 
 0.797
V7CDF5_PHAVU
Ribosomal_L2_C domain-containing protein.
    
 
 0.797
V7CIG8_PHAVU
Ribosomal_L2_C domain-containing protein.
    
 
 0.797
V7AWK4_PHAVU
JmjC domain-containing protein.
      
 0.554
V7AWJ1_PHAVU
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
    
 
 0.471
V7CBD0_PHAVU
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
    
 
 0.471
V7CNA2_PHAVU
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
    
 
 0.471
V7D023_PHAVU
Uncharacterized protein.
  
     0.447
V7AIH1_PHAVU
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
  
     0.426
V7AI16_PHAVU
Ribosomal_L2 domain-containing protein.
    
 
 0.424
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.