STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7CF11_PHAVUPectate lyase. (406 aa)    
Predicted Functional Partners:
V7CVM9_PHAVU
Uncharacterized protein.
     
 0.725
V7BC08_PHAVU
Pectinesterase domain-containing protein.
  
 
 0.721
V7C6P9_PHAVU
Pectinesterase.
  
 
 0.719
V7CSE4_PHAVU
Pectinesterase.
  
 
 0.719
V7BGX8_PHAVU
Pectinesterase.
  
 
 0.718
V7ARI2_PHAVU
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.
  
 
  0.717
V7CB89_PHAVU
Pectinesterase domain-containing protein.
  
 
 0.717
V7BD44_PHAVU
Pectinesterase.
  
 
 0.716
V7C5D5_PHAVU
Pectinesterase domain-containing protein.
  
 
 0.715
V7ANF1_PHAVU
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.
  
 
  0.714
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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