Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PSI-N | V7AK26_PHAVU | Q84U30 | V7AK26 | Photosystem I-N subunit. | Uncharacterized protein. | 0.916 |
PSI-N | V7ASU6_PHAVU | Q84U30 | V7ASU6 | Photosystem I-N subunit. | Uncharacterized protein. | 0.983 |
PSI-N | V7BDJ8_PHAVU | Q84U30 | V7BDJ8 | Photosystem I-N subunit. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.826 |
PSI-N | V7C4V0_PHAVU | Q84U30 | V7C4V0 | Photosystem I-N subunit. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.831 |
PSI-N | V7CHS4_PHAVU | Q84U30 | V7CHS4 | Photosystem I-N subunit. | STAS domain-containing protein. | 0.401 |
V7AK26_PHAVU | PSI-N | V7AK26 | Q84U30 | Uncharacterized protein. | Photosystem I-N subunit. | 0.916 |
V7AK26_PHAVU | V7AMI8_PHAVU | V7AK26 | V7AMI8 | Uncharacterized protein. | Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna. | 0.628 |
V7AK26_PHAVU | V7ASU6_PHAVU | V7AK26 | V7ASU6 | Uncharacterized protein. | Uncharacterized protein. | 0.990 |
V7AK26_PHAVU | V7BDJ8_PHAVU | V7AK26 | V7BDJ8 | Uncharacterized protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.716 |
V7AK26_PHAVU | V7C4V0_PHAVU | V7AK26 | V7C4V0 | Uncharacterized protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.716 |
V7AK26_PHAVU | V7CHS4_PHAVU | V7AK26 | V7CHS4 | Uncharacterized protein. | STAS domain-containing protein. | 0.429 |
V7AMI8_PHAVU | V7AK26_PHAVU | V7AMI8 | V7AK26 | Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna. | Uncharacterized protein. | 0.628 |
V7AMI8_PHAVU | V7BDJ8_PHAVU | V7AMI8 | V7BDJ8 | Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.935 |
V7AMI8_PHAVU | V7C4V0_PHAVU | V7AMI8 | V7C4V0 | Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.935 |
V7AMI8_PHAVU | V7CHS4_PHAVU | V7AMI8 | V7CHS4 | Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna. | STAS domain-containing protein. | 0.465 |
V7AMI8_PHAVU | V7CMN4_PHAVU | V7AMI8 | V7CMN4 | Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna. | Uncharacterized protein. | 0.985 |
V7ASU6_PHAVU | PSI-N | V7ASU6 | Q84U30 | Uncharacterized protein. | Photosystem I-N subunit. | 0.983 |
V7ASU6_PHAVU | V7AK26_PHAVU | V7ASU6 | V7AK26 | Uncharacterized protein. | Uncharacterized protein. | 0.990 |
V7ASU6_PHAVU | V7BDJ8_PHAVU | V7ASU6 | V7BDJ8 | Uncharacterized protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.814 |
V7ASU6_PHAVU | V7C4V0_PHAVU | V7ASU6 | V7C4V0 | Uncharacterized protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.821 |
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