V7CJC0_PHAVU protein (Phaseolus vulgaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

V7CJC0_PHAVU

Uncharacterized protein. (264 aa)

Predicted Functional Partners:

V7CJ43_PHAVU

0.643

V7CKF7_PHAVU

0.613

V7ALW5_PHAVU

0.522

V7B757_PHAVU

0.513

V7AQY9_PHAVU

0.500

V7BVA3_PHAVU

0.498

V7CVZ6_PHAVU

0.496

V7C169_PHAVU

0.484

V7B1C2_PHAVU

0.482

V7BF26_PHAVU

0.472

Your Current Organism:

Phaseolus vulgaris

NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V7ALW5_PHAVU	V7AQY9_PHAVU	V7ALW5	V7AQY9	CNH domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.416
V7ALW5_PHAVU	V7B1C2_PHAVU	V7ALW5	V7B1C2	CNH domain-containing protein.	Uncharacterized protein.	0.501
V7ALW5_PHAVU	V7B757_PHAVU	V7ALW5	V7B757	CNH domain-containing protein.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.495
V7ALW5_PHAVU	V7BF26_PHAVU	V7ALW5	V7BF26	CNH domain-containing protein.	Uncharacterized protein.	0.520
V7ALW5_PHAVU	V7BVA3_PHAVU	V7ALW5	V7BVA3	CNH domain-containing protein.	Uncharacterized protein.	0.446
V7ALW5_PHAVU	V7C169_PHAVU	V7ALW5	V7C169	CNH domain-containing protein.	TMF_TATA_bd domain-containing protein.	0.491
V7ALW5_PHAVU	V7CJC0_PHAVU	V7ALW5	V7CJC0	CNH domain-containing protein.	Uncharacterized protein.	0.522
V7ALW5_PHAVU	V7CKF7_PHAVU	V7ALW5	V7CKF7	CNH domain-containing protein.	Uncharacterized protein.	0.473
V7ALW5_PHAVU	V7CVZ6_PHAVU	V7ALW5	V7CVZ6	CNH domain-containing protein.	Mic1 domain-containing protein.	0.504
V7AQY9_PHAVU	V7ALW5_PHAVU	V7AQY9	V7ALW5	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	CNH domain-containing protein.	0.416
V7AQY9_PHAVU	V7B757_PHAVU	V7AQY9	V7B757	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.496
V7AQY9_PHAVU	V7BF26_PHAVU	V7AQY9	V7BF26	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.507
V7AQY9_PHAVU	V7CJC0_PHAVU	V7AQY9	V7CJC0	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.500
V7AQY9_PHAVU	V7CKF7_PHAVU	V7AQY9	V7CKF7	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.407
V7B1C2_PHAVU	V7ALW5_PHAVU	V7B1C2	V7ALW5	Uncharacterized protein.	CNH domain-containing protein.	0.501
V7B1C2_PHAVU	V7B757_PHAVU	V7B1C2	V7B757	Uncharacterized protein.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.414
V7B1C2_PHAVU	V7BVA3_PHAVU	V7B1C2	V7BVA3	Uncharacterized protein.	Uncharacterized protein.	0.410
V7B1C2_PHAVU	V7C169_PHAVU	V7B1C2	V7C169	Uncharacterized protein.	TMF_TATA_bd domain-containing protein.	0.427
V7B1C2_PHAVU	V7CJC0_PHAVU	V7B1C2	V7CJC0	Uncharacterized protein.	Uncharacterized protein.	0.482
V7B1C2_PHAVU	V7CKF7_PHAVU	V7B1C2	V7CKF7	Uncharacterized protein.	Uncharacterized protein.	0.442