STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7CJS4_PHAVUUncharacterized protein. (247 aa)    
Predicted Functional Partners:
V7CS20_PHAVU
Uncharacterized protein.
      
 0.555
V7AP05_PHAVU
Uncharacterized protein.
      
 0.456
V7B0Y7_PHAVU
Protein-lysine N-methyltransferase PHAVU_008G009300g; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.
      
 0.442
V7BT50_PHAVU
Uncharacterized protein.
      
 0.441
V7CPR0_PHAVU
RING-type E3 ubiquitin transferase.
      
 0.440
V7CCC2_PHAVU
Uncharacterized protein.
      
 0.412
V7AF52_PHAVU
Uncharacterized protein.
      
 0.405
V7BA15_PHAVU
Uncharacterized protein.
      
 0.405
V7CQY0_PHAVU
Uncharacterized protein.
      
 0.405
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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