STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7CJS7_PHAVUMINDY_DUB domain-containing protein. (720 aa)    
Predicted Functional Partners:
V7CGW4_PHAVU
Ubiquitin-like domain-containing protein.
    
   0.852
V7AS46_PHAVU
Ubiquitin-like domain-containing protein.
   
   0.801
V7D161_PHAVU
Ubiquitin-like domain-containing protein.
   
   0.801
V7B1W2_PHAVU
SET domain-containing protein.
    
 0.624
V7B613_PHAVU
SET domain-containing protein.
    
 0.624
V7B812_PHAVU
SET domain-containing protein.
    
 0.624
V7BDL1_PHAVU
SET domain-containing protein.
    
 0.624
V7BLU7_PHAVU
SET domain-containing protein.
    
 0.624
V7BVH8_PHAVU
SET domain-containing protein.
    
 0.624
V7C2M2_PHAVU
Rubis-subs-bind domain-containing protein.
    
 0.624
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.